The bioinformatics analysis pipeline juliaapolonio/MR_workflow is a pipeline for Mendelian Randomization and sensitivity analysis between a given GWAS sumstats and QTL data.
Technical information to the pipeline run are collected in folder pipeline_info, including software versions
collected at runtime in file software_versions.yml (can be
viewed with a text editor), all parameter settings in file
params_{date}_{time}.json (can be viewed with a text
editor), execution report in file
execution_report_{date}_{time}.html, execution trace in
file execution_trace_{date}_{time}.txt, execution timeline
in file execution_timelime_{date}_{time}.html, and pipeline
direct acyclic graph (DAG) in file
pipeline_dag_{date}_{time}.html.
This report (file summary_report.html) is located in
folder summary_report of the original pipeline results
folder. In this file, all links to files and folders are relative,
therefore hyperlinks will only work when the report is at its original
place in the pipeline results folder. Plots specifically produced for
this report (if any) can be also found in folder summary_report.
Please cite the pipeline publication and any software tools used by the pipeline (see citations) when you use any of the pipeline results in your study.